Python commands used to sanitize the compadre_gen_chem.csv.gz file

(chemosan_env) ➜  chemo_sanitizer git:(master) ✗ python src/scripts/chemosanitizer.py ~/Dropbox/LHT-metabolomes/Data/compadre_gen_chem.csv.gz ~/Dropbox/LHT-metabolomes/Data/compadre_gen_chem_sanitized.csv.gz InChI_DNP 12

Then in python

>>> from chemosanitizer.chemosanitizer import gzipper
>>> gzipper('/Users/pma/Dropbox/LHT-metabolomes/Data/compadre_gen_chem_sanitized.csv', '\t', ',')

We can now load the dt in datawarrior.